Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 CLUHP6-201ENST00000580789 941 ntBASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 RPSAP52-203ENST00000622976 1023 ntBASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 BX539320.1-201ENST00000623759 877 ntBASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD3Q7Z3D4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 AC067930.6-201ENST00000623257 4947 ntBASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LYSMD3Q7Z3D4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 AC012508.2-201ENST00000567613 1472 ntBASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms