Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
OTOP1Q7RTM1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 AC078991.1-201ENST00000437297 610 ntBASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 MARK2P5-201ENST00000507649 634 ntBASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 AC005357.2-202ENST00000590507 1060 ntBASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 PRSS30P-206ENST00000641773 873 ntBASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OTOP1Q7RTM1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AL391280.1-201ENST00000506969 1062 ntBASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AC242376.1-201ENST00000559033 726 ntBASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 AC132872.4-202ENST00000622924 2756 ntBASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OTOP1Q7RTM1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OTOP1Q7RTM1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms