Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 AL391280.1-201ENST00000506969 1062 ntBASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 AC004466.1-201ENST00000599515 1080 ntBASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC62Q6P9F0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 REXO1L5P-201ENST00000622260 2098 ntBASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 AC106820.3-201ENST00000561653 397 ntBASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 PPY2P-201ENST00000582808 702 ntBASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 OR10B1P-201ENST00000601666 907 ntBASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC62Q6P9F0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AC007950.2-201ENST00000615045 2347 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AC068418.2-201ENST00000577309 3703 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AC055811.4-201ENST00000624039 1754 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 CALR4P-201ENST00000431943 946 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms