Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 AL158070.2-201ENST00000623713 1621 ntBASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 KRT8P14-201ENST00000414254 1442 ntBASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3F3CQ6NXT2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.15□□□□□ -0.15
H3F3CQ6NXT2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 AP002414.2-201ENST00000591780 3365 ntBASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 YBX1P6-201ENST00000442962 1002 ntBASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 AC092658.1-201ENST00000505836 891 ntBASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 AC023310.1-201ENST00000554836 735 ntBASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 AL603764.1-201ENST00000636452 321 ntBASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H3F3CQ6NXT2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 FAM197Y7-201ENST00000432892 766 ntBASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AL355994.2-201ENST00000447882 704 ntBASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AC078819.1-201ENST00000547454 765 ntBASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AC012085.1-201ENST00000548270 765 ntBASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3F3CQ6NXT2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms