Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 AC093726.1-201ENST00000608064 963 ntBASIC18.26■□□□□ 0.51
RNF20Q5VTR2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 INTS4P2-202ENST00000614726 2019 ntBASIC18.26■□□□□ 0.51
RNF20Q5VTR2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 LILRP1-201ENST00000444199 1370 ntBASIC18.26■□□□□ 0.51
RNF20Q5VTR2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF20Q5VTR2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 NUS1P3-201ENST00000423502 862 ntBASIC18.25■□□□□ 0.51
RNF20Q5VTR2 AC134915.1-201ENST00000426461 574 ntBASIC18.25■□□□□ 0.51
RNF20Q5VTR2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 FAM207CP-201ENST00000443486 507 ntBASIC18.25■□□□□ 0.51
RNF20Q5VTR2 TSPY16P-201ENST00000449843 468 ntBASIC18.25■□□□□ 0.51
RNF20Q5VTR2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 SERBP1P5-201ENST00000510079 1181 ntBASIC18.25■□□□□ 0.51
RNF20Q5VTR2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF20Q5VTR2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 AC087499.6-201ENST00000411576 835 ntBASIC18.24■□□□□ 0.51
RNF20Q5VTR2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 AL442647.2-201ENST00000429864 857 ntBASIC18.24■□□□□ 0.51
RNF20Q5VTR2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF20Q5VTR2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms