Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AC006033.1-201ENST00000440505 426 ntBASIC16.15■□□□□ 0.18
VARS2Q5ST30 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AC104306.2-201ENST00000451877 341 ntBASIC16.15■□□□□ 0.18
VARS2Q5ST30 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AC004466.1-201ENST00000599515 1080 ntBASIC16.15■□□□□ 0.18
VARS2Q5ST30 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.15■□□□□ 0.18
VARS2Q5ST30 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARS2Q5ST30 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
VARS2Q5ST30 AL022393.1-201ENST00000625142 1677 ntBASIC16.14■□□□□ 0.18
VARS2Q5ST30 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
VARS2Q5ST30 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
VARS2Q5ST30 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AC020658.6-201ENST00000623564 1870 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AL023775.1-201ENST00000454907 1746 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 REXO1L4P-201ENST00000605109 1937 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AL391280.1-201ENST00000506969 1062 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AP003171.2-201ENST00000528208 925 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 HMGB1P8-201ENST00000558211 949 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 RN7SL713P-201ENST00000582127 302 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AL022328.3-201ENST00000607943 679 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 AC093783.1-201ENST00000612976 329 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 MIR6727-201ENST00000620702 65 ntBASIC16.14■□□□□ 0.17
VARS2Q5ST30 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.14■□□□□ 0.17
VARS2Q5ST30 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARS2Q5ST30 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms