Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 AC097376.2-205ENST00000610159 5334 ntBASIC14.76□□□□□ -0.05
PCDH1Q08174 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDH1Q08174 DFFBP1-201ENST00000433250 979 ntBASIC14.76□□□□□ -0.05
PCDH1Q08174 FAM207CP-201ENST00000443486 507 ntBASIC14.76□□□□□ -0.05
PCDH1Q08174 INGX-202ENST00000489074 768 ntBASIC14.76□□□□□ -0.05
PCDH1Q08174 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDH1Q08174 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.76□□□□□ -0.05
PCDH1Q08174 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDH1Q08174 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDH1Q08174 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCDH1Q08174 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDH1Q08174 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
PCDH1Q08174 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH1Q08174 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH1Q08174 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDH1Q08174 HLA-K-203ENST00000430151 1046 ntBASIC14.75□□□□□ -0.05
PCDH1Q08174 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.75□□□□□ -0.05
PCDH1Q08174 GNAQP1-201ENST00000444815 1067 ntBASIC14.75□□□□□ -0.05
PCDH1Q08174 UGT1A2P-201ENST00000454886 866 ntBASIC14.75□□□□□ -0.05
PCDH1Q08174 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDH1Q08174 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDH1Q08174 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDH1Q08174 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH1Q08174 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDH1Q08174 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDH1Q08174 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.75□□□□□ -0.05
PCDH1Q08174 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH1Q08174 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH1Q08174 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH1Q08174 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCDH1Q08174 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH1Q08174 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms