Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.82■□□□□ 0.76
COL16A1Q07092 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 AC012508.2-201ENST00000567613 1472 ntBASIC19.82■□□□□ 0.76
COL16A1Q07092 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL16A1Q07092 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.82■□□□□ 0.76
COL16A1Q07092 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
COL16A1Q07092 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL16A1Q07092 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.81■□□□□ 0.76
COL16A1Q07092 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.81■□□□□ 0.76
COL16A1Q07092 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COL16A1Q07092 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
COL16A1Q07092 AC053503.3-201ENST00000448375 114 ntBASIC19.81■□□□□ 0.76
COL16A1Q07092 AC095040.1-201ENST00000513286 675 ntBASIC19.81■□□□□ 0.76
COL16A1Q07092 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC19.81■□□□□ 0.76
COL16A1Q07092 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.81■□□□□ 0.76
COL16A1Q07092 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.81■□□□□ 0.76
COL16A1Q07092 AL596087.1-201ENST00000400979 1969 ntBASIC19.81■□□□□ 0.76
COL16A1Q07092 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COL16A1Q07092 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL16A1Q07092 AL359258.3-201ENST00000622910 2331 ntBASIC19.81■□□□□ 0.76
COL16A1Q07092 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.81■□□□□ 0.76
COL16A1Q07092 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.8■□□□□ 0.76
COL16A1Q07092 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 WASH3P-207ENST00000560956 1394 ntBASIC19.8■□□□□ 0.76
COL16A1Q07092 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 AC098934.1-203ENST00000442868 1262 ntBASIC19.8■□□□□ 0.76
COL16A1Q07092 RN7SL147P-201ENST00000487345 298 ntBASIC19.8■□□□□ 0.76
COL16A1Q07092 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC19.8■□□□□ 0.76
COL16A1Q07092 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC19.8■□□□□ 0.76
COL16A1Q07092 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC19.8■□□□□ 0.76
COL16A1Q07092 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC19.8■□□□□ 0.76
COL16A1Q07092 MIR6125-201ENST00000618986 96 ntBASIC19.8■□□□□ 0.76
COL16A1Q07092 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL16A1Q07092 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 AC099398.1-201ENST00000567919 2776 ntBASIC19.8■□□□□ 0.76
COL16A1Q07092 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
COL16A1Q07092 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL16A1Q07092 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
COL16A1Q07092 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.8■□□□□ 0.76
COL16A1Q07092 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC19.8■□□□□ 0.76
COL16A1Q07092 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC19.8■□□□□ 0.76
COL16A1Q07092 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC19.8■□□□□ 0.76
COL16A1Q07092 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC19.8■□□□□ 0.76
COL16A1Q07092 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL16A1Q07092 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.8■□□□□ 0.76
COL16A1Q07092 KRT18P37-201ENST00000520711 1282 ntBASIC19.8■□□□□ 0.76
COL16A1Q07092 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC19.8■□□□□ 0.76
COL16A1Q07092 KRT8P2-201ENST00000556193 944 ntBASIC19.8■□□□□ 0.76
COL16A1Q07092 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC19.8■□□□□ 0.76
COL16A1Q07092 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC19.8■□□□□ 0.76
COL16A1Q07092 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC19.8■□□□□ 0.76
COL16A1Q07092 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC19.8■□□□□ 0.76
COL16A1Q07092 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.8■□□□□ 0.76
COL16A1Q07092 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.8■□□□□ 0.76
COL16A1Q07092 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
COL16A1Q07092 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.79■□□□□ 0.76
COL16A1Q07092 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.79■□□□□ 0.76
COL16A1Q07092 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC19.79■□□□□ 0.76
COL16A1Q07092 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 NQO2-204ENST00000380454 851 ntTSL 2 BASIC19.79■□□□□ 0.76
COL16A1Q07092 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL16A1Q07092 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC19.79■□□□□ 0.76
COL16A1Q07092 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.79■□□□□ 0.76
COL16A1Q07092 AC006529.1-201ENST00000459978 637 ntBASIC19.79■□□□□ 0.76
COL16A1Q07092 GPX3-202ENST00000517973 612 ntTSL 3 BASIC19.79■□□□□ 0.76
COL16A1Q07092 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms