Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC098831.1-202ENST00000438821 336 ntBASIC12.94□□□□□ -0.34
SSBP1Q04837 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.94□□□□□ -0.34
SSBP1Q04837 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.94□□□□□ -0.34
SSBP1Q04837 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.94□□□□□ -0.34
SSBP1Q04837 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.94□□□□□ -0.34
SSBP1Q04837 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.94□□□□□ -0.34
SSBP1Q04837 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SSBP1Q04837 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.94□□□□□ -0.34
SSBP1Q04837 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
SSBP1Q04837 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SSBP1Q04837 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSBP1Q04837 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SSBP1Q04837 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SSBP1Q04837 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.93□□□□□ -0.34
SSBP1Q04837 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 AC079781.5-202ENST00000641784 3743 ntBASIC12.93□□□□□ -0.34
SSBP1Q04837 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.93□□□□□ -0.34
SSBP1Q04837 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 HCG4P8-203ENST00000443049 980 ntBASIC12.93□□□□□ -0.34
SSBP1Q04837 AC074386.1-202ENST00000463561 864 ntBASIC12.93□□□□□ -0.34
SSBP1Q04837 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP1Q04837 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.93□□□□□ -0.34
SSBP1Q04837 SLED1-202ENST00000512051 380 ntBASIC12.93□□□□□ -0.34
SSBP1Q04837 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSBP1Q04837 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.93□□□□□ -0.34
SSBP1Q04837 AC025181.2-201ENST00000606994 802 ntBASIC12.93□□□□□ -0.34
SSBP1Q04837 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 AC074044.1-201ENST00000609673 707 ntBASIC12.93□□□□□ -0.34
SSBP1Q04837 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP1Q04837 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.93□□□□□ -0.34
SSBP1Q04837 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
SSBP1Q04837 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.93□□□□□ -0.34
SSBP1Q04837 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 PPT1-213ENST00000641319 2388 ntBASIC12.93□□□□□ -0.34
SSBP1Q04837 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSBP1Q04837 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.93□□□□□ -0.34
SSBP1Q04837 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SSBP1Q04837 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSBP1Q04837 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSBP1Q04837 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.92□□□□□ -0.34
SSBP1Q04837 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSBP1Q04837 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms