Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NKX6-1P78426 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX6-1P78426 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.56□□□□□ -0.24
NKX6-1P78426 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX6-1P78426 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX6-1P78426 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-1P78426 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.56□□□□□ -0.24
NKX6-1P78426 AC133539.2-201ENST00000604757 467 ntBASIC13.56□□□□□ -0.24
NKX6-1P78426 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NKX6-1P78426 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-1P78426 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 AC093525.8-201ENST00000624099 1342 ntBASIC13.56□□□□□ -0.24
NKX6-1P78426 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-1P78426 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-1P78426 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NKX6-1P78426 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-1P78426 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-1P78426 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX6-1P78426 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX6-1P78426 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.55□□□□□ -0.24
NKX6-1P78426 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 RN7SL399P-201ENST00000471648 279 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 RNA5SP412-201ENST00000516234 123 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.55□□□□□ -0.24
NKX6-1P78426 TDH-203ENST00000531764 1110 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX6-1P78426 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX6-1P78426 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.55□□□□□ -0.24
NKX6-1P78426 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 AC244093.1-201ENST00000610837 814 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 CU634019.7-201ENST00000624153 1185 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 FP236241.2-201ENST00000624906 1185 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NKX6-1P78426 AC010491.1-201ENST00000563101 2797 ntBASIC13.55□□□□□ -0.24
NKX6-1P78426 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms