Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.89□□□□□ -0.03
YBX1P67809 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
YBX1P67809 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
YBX1P67809 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
YBX1P67809 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.88□□□□□ -0.03
YBX1P67809 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.88□□□□□ -0.03
YBX1P67809 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
YBX1P67809 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 AC134915.1-201ENST00000426461 574 ntBASIC14.88□□□□□ -0.03
YBX1P67809 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.88□□□□□ -0.03
YBX1P67809 AC120045.2-201ENST00000567334 178 ntBASIC14.88□□□□□ -0.03
YBX1P67809 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.88□□□□□ -0.03
YBX1P67809 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.88□□□□□ -0.03
YBX1P67809 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
YBX1P67809 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YBX1P67809 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.88□□□□□ -0.03
YBX1P67809 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.87□□□□□ -0.03
YBX1P67809 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.87□□□□□ -0.03
YBX1P67809 MTHFR-210ENST00000641407 2387 ntBASIC14.87□□□□□ -0.03
YBX1P67809 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
YBX1P67809 AL442647.2-201ENST00000429864 857 ntBASIC14.87□□□□□ -0.03
YBX1P67809 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.87□□□□□ -0.03
YBX1P67809 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.87□□□□□ -0.03
YBX1P67809 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 REXO1L2P-201ENST00000425429 2069 ntBASIC14.87□□□□□ -0.03
YBX1P67809 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.87□□□□□ -0.03
YBX1P67809 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.87□□□□□ -0.03
YBX1P67809 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.87□□□□□ -0.03
YBX1P67809 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
YBX1P67809 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YBX1P67809 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
YBX1P67809 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms