Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO4P61968 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.42□□□□□ -0.42
LMO4P61968 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LMO4P61968 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 SSR4P1-203ENST00000599569 2260 ntBASIC12.42□□□□□ -0.42
LMO4P61968 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LMO4P61968 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO4P61968 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO4P61968 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LMO4P61968 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.41□□□□□ -0.42
LMO4P61968 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO4P61968 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO4P61968 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 MROH4P-201ENST00000431302 1578 ntBASIC12.41□□□□□ -0.42
LMO4P61968 EIF4HP1-201ENST00000453115 687 ntBASIC12.41□□□□□ -0.42
LMO4P61968 IGHJ2P-201ENST00000454480 60 ntBASIC12.41□□□□□ -0.42
LMO4P61968 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 MIR4783-201ENST00000580343 82 ntBASIC12.41□□□□□ -0.42
LMO4P61968 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 AC084346.2-201ENST00000607097 949 ntBASIC12.41□□□□□ -0.42
LMO4P61968 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LMO4P61968 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 AC138649.2-201ENST00000615886 705 ntBASIC12.41□□□□□ -0.42
LMO4P61968 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO4P61968 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LMO4P61968 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO4P61968 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO4P61968 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO4P61968 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO4P61968 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO4P61968 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO4P61968 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO4P61968 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO4P61968 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO4P61968 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO4P61968 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms