Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
VBP1P61758 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 RCN1P1-201ENST00000400413 996 ntBASIC13.75□□□□□ -0.21
VBP1P61758 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.75□□□□□ -0.21
VBP1P61758 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 KRT16P4-201ENST00000453883 522 ntBASIC13.75□□□□□ -0.21
VBP1P61758 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.75□□□□□ -0.21
VBP1P61758 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.75□□□□□ -0.21
VBP1P61758 AC008667.4-201ENST00000607370 168 ntBASIC13.75□□□□□ -0.21
VBP1P61758 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.75□□□□□ -0.21
VBP1P61758 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.75□□□□□ -0.21
VBP1P61758 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
VBP1P61758 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 AL118506.1-201ENST00000601296 3082 ntBASIC13.75□□□□□ -0.21
VBP1P61758 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 AC020658.7-201ENST00000624274 2442 ntBASIC13.74□□□□□ -0.21
VBP1P61758 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
VBP1P61758 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.74□□□□□ -0.21
VBP1P61758 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.74□□□□□ -0.21
VBP1P61758 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.74□□□□□ -0.21
VBP1P61758 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 OR7E47P-204ENST00000575924 449 ntBASIC13.74□□□□□ -0.21
VBP1P61758 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 AC138894.3-201ENST00000603787 634 ntBASIC13.74□□□□□ -0.21
VBP1P61758 AC097359.3-201ENST00000603982 1210 ntBASIC13.74□□□□□ -0.21
VBP1P61758 AC012306.2-201ENST00000609350 630 ntBASIC13.74□□□□□ -0.21
VBP1P61758 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 AL645728.2-201ENST00000641974 660 ntBASIC13.74□□□□□ -0.21
VBP1P61758 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 KRT8P24-201ENST00000560290 1559 ntBASIC13.74□□□□□ -0.21
VBP1P61758 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
VBP1P61758 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VBP1P61758 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.74□□□□□ -0.21
VBP1P61758 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.73□□□□□ -0.21
VBP1P61758 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.73□□□□□ -0.21
VBP1P61758 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.73□□□□□ -0.21
VBP1P61758 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VBP1P61758 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.73□□□□□ -0.21
VBP1P61758 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VBP1P61758 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VBP1P61758 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
VBP1P61758 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms