Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXG1P55316 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
FOXG1P55316 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
FOXG1P55316 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.36□□□□□ -0.27
FOXG1P55316 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
FOXG1P55316 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.36□□□□□ -0.27
FOXG1P55316 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.36□□□□□ -0.27
FOXG1P55316 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.36□□□□□ -0.27
FOXG1P55316 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.36□□□□□ -0.27
FOXG1P55316 AC017083.2-201ENST00000608069 979 ntBASIC13.36□□□□□ -0.27
FOXG1P55316 AL008721.1-201ENST00000609964 604 ntBASIC13.36□□□□□ -0.27
FOXG1P55316 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
FOXG1P55316 TCAF2P1-201ENST00000291129 2421 ntBASIC13.36□□□□□ -0.27
FOXG1P55316 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXG1P55316 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 FER1L4-210ENST00000615531 5998 ntBASIC13.36□□□□□ -0.27
FOXG1P55316 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXG1P55316 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXG1P55316 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.36□□□□□ -0.27
FOXG1P55316 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.36□□□□□ -0.27
FOXG1P55316 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
FOXG1P55316 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
FOXG1P55316 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
FOXG1P55316 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.35□□□□□ -0.27
FOXG1P55316 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.35□□□□□ -0.27
FOXG1P55316 AC026434.2-201ENST00000506094 1078 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 AC022616.1-201ENST00000518688 554 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 AC104989.1-201ENST00000519711 778 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.35□□□□□ -0.27
FOXG1P55316 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 AC078819.1-201ENST00000547454 765 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 AC012085.1-201ENST00000548270 765 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 KRT90P-201ENST00000549264 1064 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 DUX4L47-201ENST00000566374 394 ntBASIC13.35□□□□□ -0.27
FOXG1P55316 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXG1P55316 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXG1P55316 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXG1P55316 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms