Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 PMS2P7-201ENST00000506558 1336 ntBASIC12.34□□□□□ -0.43
RAB5CP51148 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
RAB5CP51148 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RAB5CP51148 AC073548.1-201ENST00000624088 1882 ntBASIC12.34□□□□□ -0.43
RAB5CP51148 FP325330.2-201ENST00000624219 5630 ntBASIC12.34□□□□□ -0.43
RAB5CP51148 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.34□□□□□ -0.43
RAB5CP51148 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB5CP51148 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB5CP51148 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB5CP51148 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
RAB5CP51148 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 BX276092.5-203ENST00000456199 560 ntBASIC12.33□□□□□ -0.44
RAB5CP51148 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.33□□□□□ -0.44
RAB5CP51148 AC093827.2-201ENST00000512654 315 ntBASIC12.33□□□□□ -0.44
RAB5CP51148 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB5CP51148 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
RAB5CP51148 AL121672.3-201ENST00000608644 468 ntBASIC12.33□□□□□ -0.44
RAB5CP51148 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 AC084364.1-201ENST00000551967 1556 ntBASIC12.33□□□□□ -0.44
RAB5CP51148 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB5CP51148 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB5CP51148 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB5CP51148 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB5CP51148 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 AC016397.2-201ENST00000624848 1985 ntBASIC12.32□□□□□ -0.44
RAB5CP51148 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB5CP51148 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms