Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.65□□□□□ -0.22
SRP9P49458 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.65□□□□□ -0.22
SRP9P49458 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.65□□□□□ -0.22
SRP9P49458 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.65□□□□□ -0.22
SRP9P49458 AC051619.7-201ENST00000568314 623 ntBASIC13.65□□□□□ -0.22
SRP9P49458 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.65□□□□□ -0.22
SRP9P49458 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.65□□□□□ -0.22
SRP9P49458 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.65□□□□□ -0.22
SRP9P49458 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SRP9P49458 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 AC136759.1-202ENST00000530858 2194 ntBASIC13.65□□□□□ -0.22
SRP9P49458 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SRP9P49458 AC018892.3-201ENST00000623986 2499 ntBASIC13.65□□□□□ -0.22
SRP9P49458 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SRP9P49458 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRP9P49458 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SRP9P49458 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
SRP9P49458 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SRP9P49458 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SRP9P49458 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SRP9P49458 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.64□□□□□ -0.23
SRP9P49458 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SRP9P49458 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.64□□□□□ -0.23
SRP9P49458 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.64□□□□□ -0.23
SRP9P49458 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.64□□□□□ -0.23
SRP9P49458 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.64□□□□□ -0.23
SRP9P49458 AC106028.4-201ENST00000614509 607 ntBASIC13.64□□□□□ -0.23
SRP9P49458 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.64□□□□□ -0.23
SRP9P49458 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.64□□□□□ -0.23
SRP9P49458 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRP9P49458 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SRP9P49458 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SRP9P49458 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 CYP4F24P-201ENST00000586049 1580 ntBASIC13.63□□□□□ -0.23
SRP9P49458 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.63□□□□□ -0.23
SRP9P49458 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SRP9P49458 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms