Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.97■□□□□ 0.31
TM4SF4P48230 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.96■□□□□ 0.31
TM4SF4P48230 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TM4SF4P48230 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.96■□□□□ 0.31
TM4SF4P48230 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TM4SF4P48230 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.96■□□□□ 0.31
TM4SF4P48230 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.96■□□□□ 0.31
TM4SF4P48230 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.96■□□□□ 0.31
TM4SF4P48230 AC244197.1-201ENST00000456494 951 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 RN7SL494P-201ENST00000461517 304 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.96■□□□□ 0.31
TM4SF4P48230 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.96■□□□□ 0.31
TM4SF4P48230 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.96■□□□□ 0.31
TM4SF4P48230 MIR2392-201ENST00000584881 84 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 AP005212.2-201ENST00000584979 510 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 PEBP1P2-201ENST00000603980 558 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 AC002044.2-201ENST00000624910 970 ntBASIC16.96■□□□□ 0.31
TM4SF4P48230 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.96■□□□□ 0.31
TM4SF4P48230 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TM4SF4P48230 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TM4SF4P48230 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TM4SF4P48230 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.96■□□□□ 0.3
TM4SF4P48230 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TM4SF4P48230 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TM4SF4P48230 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TM4SF4P48230 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.95■□□□□ 0.3
TM4SF4P48230 SALL4P5-201ENST00000419001 1760 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 AL672207.1-201ENST00000328462 1570 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.95■□□□□ 0.3
TM4SF4P48230 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TM4SF4P48230 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.95■□□□□ 0.3
TM4SF4P48230 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.95■□□□□ 0.3
TM4SF4P48230 OR2R1P-201ENST00000441404 914 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.95■□□□□ 0.3
TM4SF4P48230 AC131206.1-201ENST00000538078 1211 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 AC068867.1-201ENST00000559855 150 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 AC027139.1-201ENST00000565286 951 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.95■□□□□ 0.3
TM4SF4P48230 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.95■□□□□ 0.3
TM4SF4P48230 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.95■□□□□ 0.3
TM4SF4P48230 MME-218ENST00000625667 363 ntTSL 5 BASIC16.95■□□□□ 0.3
TM4SF4P48230 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TM4SF4P48230 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.95■□□□□ 0.3
TM4SF4P48230 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 AC092127.1-201ENST00000567093 3455 ntBASIC16.95■□□□□ 0.3
TM4SF4P48230 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.95■□□□□ 0.3
TM4SF4P48230 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM4SF4P48230 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.94■□□□□ 0.3
TM4SF4P48230 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TM4SF4P48230 CICP11-201ENST00000434745 2827 ntBASIC16.94■□□□□ 0.3
TM4SF4P48230 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TM4SF4P48230 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TM4SF4P48230 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM4SF4P48230 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TM4SF4P48230 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.94■□□□□ 0.3
TM4SF4P48230 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.94■□□□□ 0.3
TM4SF4P48230 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.94■□□□□ 0.3
TM4SF4P48230 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.94■□□□□ 0.3
TM4SF4P48230 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.94■□□□□ 0.3
TM4SF4P48230 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.94■□□□□ 0.3
TM4SF4P48230 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.94■□□□□ 0.3
TM4SF4P48230 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms