Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL354989.2-201ENST00000435838 1540 ntBASIC14.41□□□□□ -0.1
GABRA4P48169 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GABRA4P48169 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA4P48169 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA4P48169 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GABRA4P48169 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.4□□□□□ -0.1
GABRA4P48169 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.4□□□□□ -0.1
GABRA4P48169 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GABRA4P48169 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 AL391280.1-201ENST00000506969 1062 ntBASIC14.4□□□□□ -0.1
GABRA4P48169 FAM86HP-204ENST00000513466 959 ntBASIC14.4□□□□□ -0.1
GABRA4P48169 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.4□□□□□ -0.1
GABRA4P48169 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 RN7SL560P-201ENST00000577943 264 ntBASIC14.4□□□□□ -0.1
GABRA4P48169 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.4□□□□□ -0.1
GABRA4P48169 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.4□□□□□ -0.1
GABRA4P48169 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.4□□□□□ -0.1
GABRA4P48169 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.4□□□□□ -0.1
GABRA4P48169 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.4□□□□□ -0.1
GABRA4P48169 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GABRA4P48169 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
GABRA4P48169 AC138035.3-201ENST00000622706 2791 ntBASIC14.39□□□□□ -0.11
GABRA4P48169 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRA4P48169 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 AL109954.1-202ENST00000564051 2148 ntBASIC14.39□□□□□ -0.11
GABRA4P48169 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GABRA4P48169 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRA4P48169 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRA4P48169 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 GOLGA2P4-201ENST00000441462 777 ntBASIC14.39□□□□□ -0.11
GABRA4P48169 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRA4P48169 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRA4P48169 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRA4P48169 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRA4P48169 OR10B1P-201ENST00000601666 907 ntBASIC14.39□□□□□ -0.11
GABRA4P48169 AC073413.1-201ENST00000603927 732 ntBASIC14.39□□□□□ -0.11
GABRA4P48169 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
GABRA4P48169 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRA4P48169 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GABRA4P48169 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRA4P48169 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms