Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC6A12P48065 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SLC6A12P48065 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC6A12P48065 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC6A12P48065 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.7□□□□□ -0.06
SLC6A12P48065 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
SLC6A12P48065 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC6A12P48065 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC6A12P48065 TP53TG3HP-202ENST00000569755 579 ntBASIC14.7□□□□□ -0.06
SLC6A12P48065 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC6A12P48065 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SLC6A12P48065 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SLC6A12P48065 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC6A12P48065 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
SLC6A12P48065 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC6A12P48065 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A12P48065 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC6A12P48065 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SLC6A12P48065 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC6A12P48065 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC6A12P48065 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC6A12P48065 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 TERF1P3-201ENST00000505638 1227 ntBASIC14.69□□□□□ -0.06
SLC6A12P48065 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 AC022616.1-201ENST00000518688 554 ntBASIC14.69□□□□□ -0.06
SLC6A12P48065 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC6A12P48065 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC6A12P48065 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC6A12P48065 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC6A12P48065 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 AP005019.2-201ENST00000615104 511 ntBASIC14.69□□□□□ -0.06
SLC6A12P48065 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.69□□□□□ -0.06
SLC6A12P48065 AL603764.1-201ENST00000636452 321 ntBASIC14.69□□□□□ -0.06
SLC6A12P48065 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SLC6A12P48065 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC6A12P48065 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC6A12P48065 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SLC6A12P48065 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC6A12P48065 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 ACKR1-201ENST00000368121 1240 ntBASIC14.68□□□□□ -0.06
SLC6A12P48065 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC6A12P48065 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC6A12P48065 EIF3FP3-201ENST00000434851 1086 ntBASIC14.68□□□□□ -0.06
SLC6A12P48065 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.68□□□□□ -0.06
SLC6A12P48065 AL162726.2-201ENST00000438986 1017 ntBASIC14.68□□□□□ -0.06
SLC6A12P48065 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC6A12P48065 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms