Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC1A1P43005 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC1A1P43005 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC1A1P43005 AC135586.1-201ENST00000539323 574 ntBASIC15.99■□□□□ 0.15
SLC1A1P43005 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC1A1P43005 DUX4L27-201ENST00000554796 1261 ntBASIC15.99■□□□□ 0.15
SLC1A1P43005 AC036164.1-201ENST00000570544 333 ntBASIC15.99■□□□□ 0.15
SLC1A1P43005 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SLC1A1P43005 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC1A1P43005 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC1A1P43005 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC1A1P43005 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC1A1P43005 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC1A1P43005 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC1A1P43005 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 DRD5P1-201ENST00000456605 1438 ntBASIC15.99■□□□□ 0.15
SLC1A1P43005 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC1A1P43005 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC1A1P43005 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC1A1P43005 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A1P43005 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A1P43005 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SLC1A1P43005 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 AL353779.1-201ENST00000434793 351 ntBASIC15.98■□□□□ 0.15
SLC1A1P43005 AC026410.3-201ENST00000514280 936 ntBASIC15.98■□□□□ 0.15
SLC1A1P43005 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC1A1P43005 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SLC1A1P43005 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 AC023511.2-201ENST00000618803 211 ntBASIC15.98■□□□□ 0.15
SLC1A1P43005 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC1A1P43005 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC1A1P43005 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SLC1A1P43005 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC1A1P43005 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 KRT18P28-201ENST00000453838 1332 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC1A1P43005 GRK6P1-201ENST00000400595 1711 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 AC022144.1-201ENST00000602255 1580 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 AL157414.3-201ENST00000624276 1954 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC1A1P43005 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC1A1P43005 AC055876.3-201ENST00000431496 288 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC1A1P43005 AL589987.1-201ENST00000453380 819 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 FAM86LP-201ENST00000478302 853 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 AC004890.2-204ENST00000481968 304 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC1A1P43005 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC1A1P43005 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC1A1P43005 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC1A1P43005 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC1A1P43005 AC008738.7-201ENST00000609744 511 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 AC138649.4-201ENST00000612222 287 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 AL138799.1-201ENST00000448213 1675 ntBASIC15.97■□□□□ 0.15
SLC1A1P43005 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC1A1P43005 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC1A1P43005 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC1A1P43005 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC1A1P43005 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms