Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.75■□□□□ 0.27
USP8P40818 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.75■□□□□ 0.27
USP8P40818 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP8P40818 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
USP8P40818 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USP8P40818 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USP8P40818 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.74■□□□□ 0.27
USP8P40818 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
USP8P40818 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USP8P40818 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP8P40818 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.74■□□□□ 0.27
USP8P40818 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.74■□□□□ 0.27
USP8P40818 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.74■□□□□ 0.27
USP8P40818 RPL13P2-201ENST00000440687 659 ntBASIC16.74■□□□□ 0.27
USP8P40818 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.74■□□□□ 0.27
USP8P40818 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.74■□□□□ 0.27
USP8P40818 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.74■□□□□ 0.27
USP8P40818 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.74■□□□□ 0.27
USP8P40818 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.74■□□□□ 0.27
USP8P40818 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
USP8P40818 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.74■□□□□ 0.27
USP8P40818 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.74■□□□□ 0.27
USP8P40818 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USP8P40818 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USP8P40818 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
USP8P40818 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USP8P40818 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USP8P40818 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
USP8P40818 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
USP8P40818 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.73■□□□□ 0.27
USP8P40818 AC055876.3-201ENST00000431496 288 ntBASIC16.73■□□□□ 0.27
USP8P40818 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.73■□□□□ 0.27
USP8P40818 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.73■□□□□ 0.27
USP8P40818 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USP8P40818 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 TIMM17BP1-201ENST00000545713 516 ntBASIC16.73■□□□□ 0.27
USP8P40818 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USP8P40818 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.73■□□□□ 0.27
USP8P40818 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.73■□□□□ 0.27
USP8P40818 AC138649.4-201ENST00000612222 287 ntBASIC16.73■□□□□ 0.27
USP8P40818 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
USP8P40818 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
USP8P40818 AC015656.1-201ENST00000624209 3578 ntBASIC16.73■□□□□ 0.27
USP8P40818 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.73■□□□□ 0.27
USP8P40818 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
USP8P40818 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USP8P40818 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
USP8P40818 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms