Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC103691.2-201ENST00000618824 433 ntBASIC20.2■□□□□ 0.82
USP6P35125 AC133540.1-201ENST00000620845 1019 ntBASIC20.2■□□□□ 0.82
USP6P35125 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC20.2■□□□□ 0.82
USP6P35125 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
USP6P35125 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
USP6P35125 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.2■□□□□ 0.82
USP6P35125 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.2■□□□□ 0.82
USP6P35125 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.2■□□□□ 0.82
USP6P35125 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 AL590440.2-201ENST00000641973 1595 ntBASIC20.2■□□□□ 0.82
USP6P35125 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
USP6P35125 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
USP6P35125 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
USP6P35125 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.2■□□□□ 0.82
USP6P35125 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC20.2■□□□□ 0.82
USP6P35125 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.19■□□□□ 0.82
USP6P35125 NOC2LP1-201ENST00000450578 752 ntBASIC20.19■□□□□ 0.82
USP6P35125 RN7SL67P-201ENST00000492147 296 ntBASIC20.19■□□□□ 0.82
USP6P35125 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
USP6P35125 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.19■□□□□ 0.82
USP6P35125 AC051619.9-201ENST00000623237 597 ntBASIC20.19■□□□□ 0.82
USP6P35125 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
USP6P35125 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.19■□□□□ 0.82
USP6P35125 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.19■□□□□ 0.82
USP6P35125 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.19■□□□□ 0.82
USP6P35125 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
USP6P35125 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
USP6P35125 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC20.19■□□□□ 0.82
USP6P35125 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.19■□□□□ 0.82
USP6P35125 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.19■□□□□ 0.82
USP6P35125 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
USP6P35125 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.19■□□□□ 0.82
USP6P35125 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 RN7SL258P-201ENST00000478664 300 ntBASIC20.19■□□□□ 0.82
USP6P35125 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP6P35125 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.19■□□□□ 0.82
USP6P35125 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
USP6P35125 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP6P35125 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USP6P35125 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.18■□□□□ 0.82
USP6P35125 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.18■□□□□ 0.82
USP6P35125 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 CAP2P1-201ENST00000557743 1390 ntBASIC20.18■□□□□ 0.82
USP6P35125 TMBIM7P-203ENST00000641617 1718 ntBASIC20.18■□□□□ 0.82
USP6P35125 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
USP6P35125 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 AC104784.1-201ENST00000473096 294 ntBASIC20.18■□□□□ 0.82
USP6P35125 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
USP6P35125 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.18■□□□□ 0.82
USP6P35125 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC20.18■□□□□ 0.82
USP6P35125 AC138894.2-201ENST00000602838 371 ntBASIC20.18■□□□□ 0.82
USP6P35125 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.18■□□□□ 0.82
USP6P35125 MIR7845-201ENST00000618396 99 ntBASIC20.18■□□□□ 0.82
USP6P35125 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
USP6P35125 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP6P35125 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.18■□□□□ 0.82
USP6P35125 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC20.18■□□□□ 0.82
USP6P35125 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.17■□□□□ 0.82
USP6P35125 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
USP6P35125 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 AC018629.1-201ENST00000623381 1736 ntBASIC20.17■□□□□ 0.82
USP6P35125 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP6P35125 LINC01165-201ENST00000445190 1623 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms