Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40LGP29965 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD40LGP29965 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 DMBT1P1-203ENST00000636837 4628 ntBASIC13.61□□□□□ -0.23
CD40LGP29965 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CD40LGP29965 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40LGP29965 DUSP5P1-201ENST00000441325 1139 ntBASIC13.61□□□□□ -0.23
CD40LGP29965 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.61□□□□□ -0.23
CD40LGP29965 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40LGP29965 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 AC068760.1-201ENST00000493579 1953 ntBASIC13.61□□□□□ -0.23
CD40LGP29965 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40LGP29965 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40LGP29965 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CD40LGP29965 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40LGP29965 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD40LGP29965 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
CD40LGP29965 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CD40LGP29965 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 GPX1P2-201ENST00000429271 606 ntBASIC13.6□□□□□ -0.23
CD40LGP29965 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40LGP29965 AC093909.1-201ENST00000504731 1122 ntBASIC13.6□□□□□ -0.23
CD40LGP29965 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40LGP29965 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.6□□□□□ -0.23
CD40LGP29965 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD40LGP29965 RN7SL510P-201ENST00000581311 263 ntBASIC13.6□□□□□ -0.23
CD40LGP29965 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.6□□□□□ -0.23
CD40LGP29965 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40LGP29965 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.6□□□□□ -0.23
CD40LGP29965 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CD40LGP29965 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40LGP29965 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40LGP29965 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD40LGP29965 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40LGP29965 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms