Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 PIN1P1-201ENST00000412108 996 ntBASIC14.06□□□□□ -0.16
SHC1P29353 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.06□□□□□ -0.16
SHC1P29353 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.06□□□□□ -0.16
SHC1P29353 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SHC1P29353 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.06□□□□□ -0.16
SHC1P29353 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 AC005912.2-201ENST00000619492 2400 ntBASIC14.05□□□□□ -0.16
SHC1P29353 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 CRB3P1-201ENST00000449338 276 ntBASIC14.05□□□□□ -0.16
SHC1P29353 RN7SL399P-201ENST00000471648 279 ntBASIC14.05□□□□□ -0.16
SHC1P29353 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.05□□□□□ -0.16
SHC1P29353 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 AC008494.3-201ENST00000606615 944 ntBASIC14.05□□□□□ -0.16
SHC1P29353 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 AC007431.3-201ENST00000623221 587 ntBASIC14.05□□□□□ -0.16
SHC1P29353 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 FGD5P1-202ENST00000614866 2498 ntBASIC14.05□□□□□ -0.16
SHC1P29353 AC104581.4-201ENST00000623126 3052 ntBASIC14.05□□□□□ -0.16
SHC1P29353 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.04□□□□□ -0.16
SHC1P29353 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 AL133267.1-201ENST00000398220 340 ntBASIC14.04□□□□□ -0.16
SHC1P29353 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.04□□□□□ -0.16
SHC1P29353 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 FAM86LP-201ENST00000478302 853 ntBASIC14.04□□□□□ -0.16
SHC1P29353 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms