Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 PIN1P1-201ENST00000412108 996 ntBASIC14.06□□□□□ -0.16
SHC1P29353 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.06□□□□□ -0.16
SHC1P29353 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.06□□□□□ -0.16
SHC1P29353 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SHC1P29353 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.06□□□□□ -0.16
SHC1P29353 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 AC005912.2-201ENST00000619492 2400 ntBASIC14.05□□□□□ -0.16
SHC1P29353 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 CRB3P1-201ENST00000449338 276 ntBASIC14.05□□□□□ -0.16
SHC1P29353 RN7SL399P-201ENST00000471648 279 ntBASIC14.05□□□□□ -0.16
SHC1P29353 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.05□□□□□ -0.16
SHC1P29353 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 AC008494.3-201ENST00000606615 944 ntBASIC14.05□□□□□ -0.16
SHC1P29353 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 AC007431.3-201ENST00000623221 587 ntBASIC14.05□□□□□ -0.16
SHC1P29353 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.05□□□□□ -0.16
SHC1P29353 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 FGD5P1-202ENST00000614866 2498 ntBASIC14.05□□□□□ -0.16
SHC1P29353 AC104581.4-201ENST00000623126 3052 ntBASIC14.05□□□□□ -0.16
SHC1P29353 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.05□□□□□ -0.16
SHC1P29353 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHC1P29353 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.04□□□□□ -0.16
SHC1P29353 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 AL133267.1-201ENST00000398220 340 ntBASIC14.04□□□□□ -0.16
SHC1P29353 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.04□□□□□ -0.16
SHC1P29353 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 FAM86LP-201ENST00000478302 853 ntBASIC14.04□□□□□ -0.16
SHC1P29353 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms