Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CNTFP26441 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.28■□□□□ 0.04
CNTFP26441 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNTFP26441 AP001267.2-201ENST00000532619 2086 ntBASIC15.28■□□□□ 0.04
CNTFP26441 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 AC006504.5-208ENST00000588784 2401 ntBASIC15.27■□□□□ 0.04
CNTFP26441 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CNTFP26441 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.27■□□□□ 0.04
CNTFP26441 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.27■□□□□ 0.04
CNTFP26441 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNTFP26441 SDHAP3-202ENST00000515467 728 ntBASIC15.27■□□□□ 0.04
CNTFP26441 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.27■□□□□ 0.04
CNTFP26441 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.27■□□□□ 0.04
CNTFP26441 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.27■□□□□ 0.03
CNTFP26441 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 AC097359.2-201ENST00000604992 2389 ntBASIC15.27■□□□□ 0.03
CNTFP26441 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CNTFP26441 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CNTFP26441 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.27■□□□□ 0.03
CNTFP26441 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.27■□□□□ 0.03
CNTFP26441 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.27■□□□□ 0.03
CNTFP26441 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CNTFP26441 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNTFP26441 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.27■□□□□ 0.03
CNTFP26441 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.26■□□□□ 0.03
CNTFP26441 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CNTFP26441 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CNTFP26441 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CNTFP26441 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CNTFP26441 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CNTFP26441 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTFP26441 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.26■□□□□ 0.03
CNTFP26441 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.26■□□□□ 0.03
CNTFP26441 RN7SL618P-201ENST00000477850 296 ntBASIC15.26■□□□□ 0.03
CNTFP26441 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.26■□□□□ 0.03
CNTFP26441 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.26■□□□□ 0.03
CNTFP26441 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.26■□□□□ 0.03
CNTFP26441 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.26■□□□□ 0.03
CNTFP26441 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CNTFP26441 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTFP26441 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.26■□□□□ 0.03
CNTFP26441 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTFP26441 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.26■□□□□ 0.03
CNTFP26441 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CNTFP26441 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNTFP26441 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms