Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.35□□□□□ -0.11
CHMP24386 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP24386 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.35□□□□□ -0.11
CHMP24386 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.35□□□□□ -0.11
CHMP24386 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP24386 AC004461.2-201ENST00000629517 803 ntBASIC14.35□□□□□ -0.11
CHMP24386 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CHMP24386 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CHMP24386 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHMP24386 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP24386 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP24386 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 SBF1P1-201ENST00000444527 5631 ntBASIC14.35□□□□□ -0.11
CHMP24386 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP24386 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP24386 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.34□□□□□ -0.11
CHMP24386 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.34□□□□□ -0.11
CHMP24386 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.34□□□□□ -0.11
CHMP24386 TIMM17BP1-201ENST00000545713 516 ntBASIC14.34□□□□□ -0.11
CHMP24386 AC092337.1-201ENST00000568699 1129 ntBASIC14.34□□□□□ -0.11
CHMP24386 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.34□□□□□ -0.11
CHMP24386 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.34□□□□□ -0.11
CHMP24386 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CHMP24386 SRD5A3P1-201ENST00000603021 949 ntBASIC14.34□□□□□ -0.11
CHMP24386 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.34□□□□□ -0.11
CHMP24386 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP24386 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CHMP24386 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHMP24386 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP24386 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.34□□□□□ -0.11
CHMP24386 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP24386 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP24386 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
CHMP24386 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CHMP24386 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP24386 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.33□□□□□ -0.11
CHMP24386 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.33□□□□□ -0.11
CHMP24386 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP24386 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP24386 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CHMP24386 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP24386 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP24386 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP24386 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms