Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC097359.2-201ENST00000604992 2389 ntBASIC13.12□□□□□ -0.31
CCL1P22362 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL1P22362 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCL1P22362 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.12□□□□□ -0.31
CCL1P22362 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL1P22362 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 RN7SL399P-201ENST00000471648 279 ntBASIC13.12□□□□□ -0.31
CCL1P22362 RPL13AP25-201ENST00000484130 612 ntBASIC13.12□□□□□ -0.31
CCL1P22362 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL1P22362 RRP7BP-205ENST00000566851 833 ntBASIC13.12□□□□□ -0.31
CCL1P22362 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL1P22362 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL1P22362 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 AC023511.2-201ENST00000618803 211 ntBASIC13.12□□□□□ -0.31
CCL1P22362 AL390754.1-201ENST00000619088 582 ntBASIC13.12□□□□□ -0.31
CCL1P22362 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CCL1P22362 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CCL1P22362 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL1P22362 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL1P22362 PCDHA3-202ENST00000532566 4594 ntBASIC13.12□□□□□ -0.31
CCL1P22362 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
CCL1P22362 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCL1P22362 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL1P22362 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL1P22362 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL1P22362 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL1P22362 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL1P22362 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CCL1P22362 AC104794.3-201ENST00000566840 1248 ntBASIC13.11□□□□□ -0.31
CCL1P22362 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL1P22362 BRI3BPP1-201ENST00000594224 787 ntBASIC13.11□□□□□ -0.31
CCL1P22362 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL1P22362 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL1P22362 AC004790.1-201ENST00000612686 536 ntBASIC13.11□□□□□ -0.31
CCL1P22362 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 KRT18P28-201ENST00000453838 1332 ntBASIC13.11□□□□□ -0.31
CCL1P22362 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL1P22362 AL354702.1-201ENST00000442006 1960 ntBASIC13.11□□□□□ -0.31
CCL1P22362 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL1P22362 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL1P22362 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms