Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 PSMD4P1-201ENST00000433951 1109 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 XBP1P1-201ENST00000436573 652 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 AC004837.1-201ENST00000446267 564 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 AC024293.1-201ENST00000467930 498 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNA3P22001 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.35■□□□□ 0.53
KCNA3P22001 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNA3P22001 AC012158.2-201ENST00000536546 354 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNA3P22001 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNA3P22001 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNA3P22001 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNA3P22001 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNA3P22001 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNA3P22001 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.35■□□□□ 0.53
KCNA3P22001 DGAT2L7P-201ENST00000602462 744 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNA3P22001 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 AC027601.3-201ENST00000622907 509 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 AC002472.4-201ENST00000641915 272 ntBASIC18.35■□□□□ 0.53
KCNA3P22001 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
KCNA3P22001 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KCNA3P22001 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KCNA3P22001 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNA3P22001 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNA3P22001 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA3P22001 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA3P22001 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KCNA3P22001 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
KCNA3P22001 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA3P22001 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA3P22001 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA3P22001 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
KCNA3P22001 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KCNA3P22001 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA3P22001 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA3P22001 AL354861.1-201ENST00000445213 355 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA3P22001 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA3P22001 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA3P22001 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA3P22001 ALG3P1-201ENST00000508806 1114 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 AC084752.1-201ENST00000509766 622 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 CR383656.3-201ENST00000551315 183 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA3P22001 AC011247.3-201ENST00000603297 438 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 AC007326.1-201ENST00000604539 458 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 AC138466.5-201ENST00000624002 808 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 AC112504.1-201ENST00000623415 1841 ntBASIC18.34■□□□□ 0.53
KCNA3P22001 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA3P22001 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA3P22001 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA3P22001 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA3P22001 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
KCNA3P22001 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA3P22001 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA3P22001 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA3P22001 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA3P22001 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA3P22001 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.33■□□□□ 0.52
KCNA3P22001 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 TSPY25P-201ENST00000429463 745 ntBASIC18.33■□□□□ 0.52
KCNA3P22001 AC092638.2-201ENST00000441105 947 ntBASIC18.33■□□□□ 0.52
KCNA3P22001 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
KCNA3P22001 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.33■□□□□ 0.52
KCNA3P22001 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.33■□□□□ 0.52
KCNA3P22001 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.33■□□□□ 0.52
KCNA3P22001 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.33■□□□□ 0.52
KCNA3P22001 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA3P22001 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms