Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA1P17096 AL162727.3-201ENST00000635661 2787 ntBASIC15.66■□□□□ 0.1
HMGA1P17096 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HMGA1P17096 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HMGA1P17096 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA1P17096 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGA1P17096 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA1P17096 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGA1P17096 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 SHC1P1-201ENST00000425230 1745 ntBASIC15.65■□□□□ 0.1
HMGA1P17096 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 PPT1-215ENST00000641471 2368 ntBASIC15.65■□□□□ 0.1
HMGA1P17096 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGA1P17096 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGA1P17096 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HMGA1P17096 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGA1P17096 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGA1P17096 DPM3-202ENST00000368399 517 ntBASIC15.65■□□□□ 0.1
HMGA1P17096 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA1P17096 AC005077.2-201ENST00000449786 690 ntBASIC15.65■□□□□ 0.1
HMGA1P17096 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA1P17096 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.65■□□□□ 0.1
HMGA1P17096 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA1P17096 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HMGA1P17096 BNIP3P13-201ENST00000599968 566 ntBASIC15.65■□□□□ 0.1
HMGA1P17096 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 AL023803.2-201ENST00000620080 638 ntBASIC15.65■□□□□ 0.1
HMGA1P17096 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGA1P17096 AC132872.4-202ENST00000622924 2756 ntBASIC15.65■□□□□ 0.1
HMGA1P17096 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA1P17096 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HMGA1P17096 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGA1P17096 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 TLE1P1-201ENST00000422965 589 ntBASIC15.64■□□□□ 0.09
HMGA1P17096 E2F3P2-201ENST00000447755 1422 ntBASIC15.64■□□□□ 0.09
HMGA1P17096 RNMTL1P1-201ENST00000454103 560 ntBASIC15.64■□□□□ 0.09
HMGA1P17096 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGA1P17096 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.64■□□□□ 0.09
HMGA1P17096 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 AC005324.6-201ENST00000587972 613 ntBASIC15.64■□□□□ 0.09
HMGA1P17096 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.64■□□□□ 0.09
HMGA1P17096 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.64■□□□□ 0.09
HMGA1P17096 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA1P17096 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA1P17096 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.64■□□□□ 0.09
HMGA1P17096 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA1P17096 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGA1P17096 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA1P17096 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HMGA1P17096 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGA1P17096 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGA1P17096 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGA1P17096 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA1P17096 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms