Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 AJ011931.1-201ENST00000618749 2492 ntBASIC16.05■□□□□ 0.16
PDGFRAP16234 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFRAP16234 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PDGFRAP16234 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFRAP16234 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDGFRAP16234 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFRAP16234 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFRAP16234 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDGFRAP16234 CU639417.3-201ENST00000624240 1404 ntBASIC16.04■□□□□ 0.16
PDGFRAP16234 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PDGFRAP16234 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 AL360270.3-201ENST00000609118 1348 ntBASIC16.04■□□□□ 0.16
PDGFRAP16234 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFRAP16234 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFRAP16234 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFRAP16234 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
PDGFRAP16234 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFRAP16234 INE1-201ENST00000456273 945 ntBASIC16.04■□□□□ 0.16
PDGFRAP16234 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.04■□□□□ 0.16
PDGFRAP16234 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PDGFRAP16234 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFRAP16234 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFRAP16234 AC124283.3-201ENST00000570869 594 ntBASIC16.04■□□□□ 0.16
PDGFRAP16234 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFRAP16234 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 WFDC1-204ENST00000613603 549 ntBASIC16.04■□□□□ 0.16
PDGFRAP16234 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDGFRAP16234 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFRAP16234 AL158070.2-201ENST00000623713 1621 ntBASIC16.04■□□□□ 0.16
PDGFRAP16234 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFRAP16234 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFRAP16234 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDGFRAP16234 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFRAP16234 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDGFRAP16234 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFRAP16234 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PDGFRAP16234 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PDGFRAP16234 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.03■□□□□ 0.16
PDGFRAP16234 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 AC063926.2-201ENST00000623766 1308 ntBASIC16.03■□□□□ 0.16
PDGFRAP16234 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PDGFRAP16234 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PDGFRAP16234 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFRAP16234 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.03■□□□□ 0.16
PDGFRAP16234 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.03■□□□□ 0.16
PDGFRAP16234 AC133539.2-201ENST00000604757 467 ntBASIC16.03■□□□□ 0.16
PDGFRAP16234 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDGFRAP16234 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDGFRAP16234 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 AL157414.3-201ENST00000624276 1954 ntBASIC16.03■□□□□ 0.16
PDGFRAP16234 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFRAP16234 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFRAP16234 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFRAP16234 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms