Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.41■□□□□ 0.06
THRAP10827 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
THRAP10827 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.41■□□□□ 0.06
THRAP10827 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
THRAP10827 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.41■□□□□ 0.06
THRAP10827 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.41■□□□□ 0.06
THRAP10827 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.41■□□□□ 0.06
THRAP10827 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
THRAP10827 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.41■□□□□ 0.06
THRAP10827 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.41■□□□□ 0.06
THRAP10827 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 IGHV3-72-202ENST00000621503 303 ntBASIC15.41■□□□□ 0.06
THRAP10827 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
THRAP10827 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.41■□□□□ 0.06
THRAP10827 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
THRAP10827 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THRAP10827 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
THRAP10827 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.41■□□□□ 0.06
THRAP10827 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
THRAP10827 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.4■□□□□ 0.06
THRAP10827 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
THRAP10827 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.4■□□□□ 0.06
THRAP10827 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.4■□□□□ 0.06
THRAP10827 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.4■□□□□ 0.06
THRAP10827 AC148477.4-201ENST00000613430 1793 ntBASIC15.4■□□□□ 0.06
THRAP10827 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.4■□□□□ 0.06
THRAP10827 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 GIMAP3P-201ENST00000495150 836 ntBASIC15.4■□□□□ 0.06
THRAP10827 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
THRAP10827 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
THRAP10827 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
THRAP10827 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.4■□□□□ 0.06
THRAP10827 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.4■□□□□ 0.06
THRAP10827 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
THRAP10827 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
THRAP10827 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.4■□□□□ 0.06
THRAP10827 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
THRAP10827 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.4■□□□□ 0.06
THRAP10827 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.4■□□□□ 0.06
THRAP10827 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
THRAP10827 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THRAP10827 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
THRAP10827 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
THRAP10827 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
THRAP10827 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.39■□□□□ 0.05
THRAP10827 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
THRAP10827 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms