Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCNYL3P0C7X3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 KRT18P64-201ENST00000434946 1219 ntBASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 MIR5189-201ENST00000577370 114 ntBASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 CICP13-201ENST00000422015 2789 ntBASIC14.85□□□□□ -0.03
CCNYL3P0C7X3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 SEC63P1-201ENST00000425785 1258 ntBASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 AL034417.3-201ENST00000641100 1043 ntBASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL3P0C7X3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms