Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC172P0C7W6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.61■□□□□ 0.25
CCDC172P0C7W6 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 AL121723.1-201ENST00000445194 1519 ntBASIC16.61■□□□□ 0.25
CCDC172P0C7W6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 AC010336.2-201ENST00000564226 506 ntBASIC16.61■□□□□ 0.25
CCDC172P0C7W6 AC140878.1-201ENST00000565277 250 ntBASIC16.61■□□□□ 0.25
CCDC172P0C7W6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 AC087499.5-201ENST00000452760 1342 ntBASIC16.61■□□□□ 0.25
CCDC172P0C7W6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC172P0C7W6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AJ011931.1-201ENST00000618749 2492 ntBASIC16.6■□□□□ 0.25
CCDC172P0C7W6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.6■□□□□ 0.25
CCDC172P0C7W6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AC107890.1-201ENST00000422478 521 ntBASIC16.6■□□□□ 0.25
CCDC172P0C7W6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AC027369.6-201ENST00000525520 931 ntBASIC16.6■□□□□ 0.25
CCDC172P0C7W6 ZNF890P-202ENST00000530367 1156 ntBASIC16.6■□□□□ 0.25
CCDC172P0C7W6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 TIMM17BP1-201ENST00000545713 516 ntBASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 LINC01115-203ENST00000606068 577 ntBASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC172P0C7W6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC172P0C7W6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC172P0C7W6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC172P0C7W6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms