Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 CNN2P8-201ENST00000421872 913 ntBASIC13.94□□□□□ -0.18
P04436 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.94□□□□□ -0.18
P04436 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.94□□□□□ -0.18
P04436 FAM197Y7-201ENST00000432892 766 ntBASIC13.94□□□□□ -0.18
P04436 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 AC007274.1-201ENST00000439805 662 ntBASIC13.94□□□□□ -0.18
P04436 YBX1P6-201ENST00000442962 1002 ntBASIC13.94□□□□□ -0.18
P04436 CSF2RBP1-201ENST00000447905 391 ntBASIC13.94□□□□□ -0.18
P04436 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
P04436 RNA5SP486-201ENST00000515961 83 ntBASIC13.94□□□□□ -0.18
P04436 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.94□□□□□ -0.18
P04436 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.94□□□□□ -0.18
P04436 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
P04436 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
P04436 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 AC023310.1-201ENST00000554836 735 ntBASIC13.94□□□□□ -0.18
P04436 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.94□□□□□ -0.18
P04436 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
P04436 RN7SL48P-201ENST00000579283 293 ntBASIC13.94□□□□□ -0.18
P04436 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 AL138709.1-201ENST00000614840 1693 ntBASIC13.94□□□□□ -0.18
P04436 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
P04436 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.94□□□□□ -0.18
P04436 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.94□□□□□ -0.18
P04436 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.93□□□□□ -0.18
P04436 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
P04436 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
P04436 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
P04436 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.93□□□□□ -0.18
P04436 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.93□□□□□ -0.18
P04436 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.93□□□□□ -0.18
P04436 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
P04436 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
P04436 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
P04436 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.93□□□□□ -0.18
P04436 AC099336.1-201ENST00000417053 1171 ntBASIC13.93□□□□□ -0.18
P04436 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.93□□□□□ -0.18
P04436 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.93□□□□□ -0.18
P04436 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.93□□□□□ -0.18
P04436 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
P04436 BNIP3P42-201ENST00000454982 569 ntBASIC13.93□□□□□ -0.18
P04436 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.93□□□□□ -0.18
P04436 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.93□□□□□ -0.18
P04436 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.93□□□□□ -0.18
P04436 BNIP3P29-201ENST00000598302 571 ntBASIC13.93□□□□□ -0.18
P04436 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.93□□□□□ -0.18
P04436 AC011447.5-201ENST00000616168 564 ntBASIC13.93□□□□□ -0.18
P04436 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.93□□□□□ -0.18
P04436 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
P04436 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.93□□□□□ -0.18
P04436 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.93□□□□□ -0.18
P04436 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.93□□□□□ -0.18
P04436 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04436 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 AC136621.1-201ENST00000624017 2304 ntBASIC13.92□□□□□ -0.18
P04436 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.92□□□□□ -0.18
P04436 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04436 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms