Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC006529.1-201ENST00000459978 637 ntBASIC9.19□□□□□ -0.94
APOBP04114 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC9.19□□□□□ -0.94
APOBP04114 AC138701.2-201ENST00000553634 226 ntBASIC9.19□□□□□ -0.94
APOBP04114 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
APOBP04114 AL160191.2-201ENST00000603975 601 ntBASIC9.19□□□□□ -0.94
APOBP04114 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.19□□□□□ -0.94
APOBP04114 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
APOBP04114 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
APOBP04114 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC9.19□□□□□ -0.94
APOBP04114 RPL35P9-201ENST00000446059 350 ntBASIC9.19□□□□□ -0.94
APOBP04114 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC9.19□□□□□ -0.94
APOBP04114 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC9.19□□□□□ -0.94
APOBP04114 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC9.19□□□□□ -0.94
APOBP04114 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
APOBP04114 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC9.19□□□□□ -0.94
APOBP04114 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC9.19□□□□□ -0.94
APOBP04114 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC9.19□□□□□ -0.94
APOBP04114 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC9.19□□□□□ -0.94
APOBP04114 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC9.19□□□□□ -0.94
APOBP04114 AP005212.2-201ENST00000584979 510 ntBASIC9.19□□□□□ -0.94
APOBP04114 AP005264.6-204ENST00000588436 719 ntBASIC9.19□□□□□ -0.94
APOBP04114 CYP4F36P-201ENST00000589193 186 ntBASIC9.19□□□□□ -0.94
APOBP04114 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 KRT8P28-201ENST00000433288 1390 ntBASIC9.19□□□□□ -0.94
APOBP04114 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
APOBP04114 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC9.19□□□□□ -0.94
APOBP04114 MIR645-201ENST00000385283 94 ntBASIC9.19□□□□□ -0.94
APOBP04114 BCAS2P2-201ENST00000425064 674 ntBASIC9.19□□□□□ -0.94
APOBP04114 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC9.19□□□□□ -0.94
APOBP04114 AC007326.1-201ENST00000604539 458 ntBASIC9.19□□□□□ -0.94
APOBP04114 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
APOBP04114 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 AL513523.2-202ENST00000427283 2040 ntBASIC9.18□□□□□ -0.94
APOBP04114 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
APOBP04114 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
APOBP04114 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC9.18□□□□□ -0.94
APOBP04114 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 MIR5001-201ENST00000580185 100 ntBASIC9.18□□□□□ -0.94
APOBP04114 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC9.18□□□□□ -0.94
APOBP04114 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 WASH7P-201ENST00000488147 1351 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A21P-201ENST00000510875 1396 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A15P-201ENST00000514465 1395 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A6P-201ENST00000515148 1394 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A16P-201ENST00000526662 1395 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A9P-201ENST00000527940 1395 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A5P-201ENST00000528738 1395 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A14P-201ENST00000530386 1395 ntBASIC9.18□□□□□ -0.94
APOBP04114 FAM90A13P-201ENST00000534703 1395 ntBASIC9.18□□□□□ -0.94
APOBP04114 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
APOBP04114 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC9.18□□□□□ -0.94
APOBP04114 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 ELP5-212ENST00000574255 671 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 AC021016.3-201ENST00000608367 477 ntBASIC9.18□□□□□ -0.94
APOBP04114 AC010976.2-201ENST00000609697 852 ntBASIC9.18□□□□□ -0.94
APOBP04114 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 MARK2P16-201ENST00000605714 1723 ntBASIC9.18□□□□□ -0.94
APOBP04114 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
APOBP04114 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC9.18□□□□□ -0.94
APOBP04114 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms