Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.15□□□□□ -0.46
IFNA1P01562 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
IFNA1P01562 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.15□□□□□ -0.46
IFNA1P01562 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
IFNA1P01562 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
IFNA1P01562 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.15□□□□□ -0.47
IFNA1P01562 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
IFNA1P01562 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
IFNA1P01562 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
IFNA1P01562 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
IFNA1P01562 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
IFNA1P01562 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
IFNA1P01562 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
IFNA1P01562 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 AL591122.2-201ENST00000624125 1853 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 KRT8P22-201ENST00000562317 1415 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 AC004987.2-201ENST00000395959 1148 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 GHSR-202ENST00000427970 912 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 LINC00265-3P-201ENST00000447588 903 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 KRT18P31-201ENST00000506277 1292 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 AC006557.2-201ENST00000592985 1240 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 AP001269.4-201ENST00000609611 512 ntBASIC12.14□□□□□ -0.47
IFNA1P01562 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.14□□□□□ -0.47
IFNA1P01562 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
IFNA1P01562 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
IFNA1P01562 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.13□□□□□ -0.47
IFNA1P01562 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 CICP11-201ENST00000434745 2827 ntBASIC12.13□□□□□ -0.47
IFNA1P01562 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.13□□□□□ -0.47
IFNA1P01562 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 RCN1P1-201ENST00000400413 996 ntBASIC12.13□□□□□ -0.47
IFNA1P01562 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 AC004945.1-201ENST00000416738 983 ntBASIC12.13□□□□□ -0.47
IFNA1P01562 NUS1P2-201ENST00000417358 873 ntBASIC12.13□□□□□ -0.47
IFNA1P01562 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.13□□□□□ -0.47
IFNA1P01562 AL136038.3-201ENST00000561909 1096 ntBASIC12.13□□□□□ -0.47
IFNA1P01562 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IFNA1P01562 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
IFNA1P01562 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms