Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLSTN1O94985 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLSTN1O94985 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLSTN1O94985 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLSTN1O94985 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.02■□□□□ 0.32
CLSTN1O94985 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLSTN1O94985 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLSTN1O94985 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 HIST3H2BA-201ENST00000436555 524 ntBASIC17.02■□□□□ 0.32
CLSTN1O94985 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.02■□□□□ 0.32
CLSTN1O94985 TARDBPP1-201ENST00000442013 1203 ntBASIC17.02■□□□□ 0.32
CLSTN1O94985 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.02■□□□□ 0.32
CLSTN1O94985 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.02■□□□□ 0.32
CLSTN1O94985 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLSTN1O94985 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.02■□□□□ 0.32
CLSTN1O94985 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.02■□□□□ 0.32
CLSTN1O94985 AC104794.3-201ENST00000566840 1248 ntBASIC17.02■□□□□ 0.32
CLSTN1O94985 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CLSTN1O94985 AC025048.3-201ENST00000590609 569 ntBASIC17.02■□□□□ 0.32
CLSTN1O94985 AC005702.4-201ENST00000618393 416 ntBASIC17.02■□□□□ 0.32
CLSTN1O94985 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CLSTN1O94985 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.02■□□□□ 0.31
CLSTN1O94985 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.02■□□□□ 0.31
CLSTN1O94985 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.02■□□□□ 0.31
CLSTN1O94985 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLSTN1O94985 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLSTN1O94985 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CLSTN1O94985 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLSTN1O94985 GRK6P1-201ENST00000400595 1711 ntBASIC17.01■□□□□ 0.31
CLSTN1O94985 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.01■□□□□ 0.31
CLSTN1O94985 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.01■□□□□ 0.31
CLSTN1O94985 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.01■□□□□ 0.31
CLSTN1O94985 LINC01115-203ENST00000606068 577 ntBASIC17.01■□□□□ 0.31
CLSTN1O94985 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLSTN1O94985 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.01■□□□□ 0.31
CLSTN1O94985 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLSTN1O94985 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.01■□□□□ 0.31
CLSTN1O94985 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLSTN1O94985 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.01■□□□□ 0.31
CLSTN1O94985 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLSTN1O94985 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLSTN1O94985 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLSTN1O94985 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLSTN1O94985 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17■□□□□ 0.31
CLSTN1O94985 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17■□□□□ 0.31
CLSTN1O94985 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLSTN1O94985 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17■□□□□ 0.31
CLSTN1O94985 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms