Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 CLK3P2-201ENST00000427566 1453 ntBASIC14.32□□□□□ -0.12
TRIM3O75382 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRIM3O75382 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM3O75382 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 NME2P1-201ENST00000426182 414 ntBASIC14.32□□□□□ -0.12
TRIM3O75382 GAPDHP21-201ENST00000450301 1010 ntBASIC14.32□□□□□ -0.12
TRIM3O75382 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 ELK1P1-201ENST00000485699 580 ntBASIC14.32□□□□□ -0.12
TRIM3O75382 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM3O75382 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM3O75382 CR383656.12-201ENST00000549567 513 ntBASIC14.32□□□□□ -0.12
TRIM3O75382 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.32□□□□□ -0.12
TRIM3O75382 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM3O75382 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.32□□□□□ -0.12
TRIM3O75382 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.32□□□□□ -0.12
TRIM3O75382 TMEM261P1-201ENST00000604899 340 ntBASIC14.32□□□□□ -0.12
TRIM3O75382 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.32□□□□□ -0.12
TRIM3O75382 MIR8072-201ENST00000614241 80 ntBASIC14.32□□□□□ -0.12
TRIM3O75382 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM3O75382 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 COX5BP8-201ENST00000416911 349 ntBASIC14.31□□□□□ -0.12
TRIM3O75382 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM3O75382 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 AC104596.2-201ENST00000512793 793 ntBASIC14.31□□□□□ -0.12
TRIM3O75382 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 CTBP2P3-201ENST00000585629 1255 ntBASIC14.31□□□□□ -0.12
TRIM3O75382 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM3O75382 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM3O75382 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.31□□□□□ -0.12
TRIM3O75382 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM3O75382 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms