Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
ATP2A1O14983 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A1O14983 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A1O14983 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.4■□□□□ 0.38
ATP2A1O14983 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.4■□□□□ 0.38
ATP2A1O14983 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.4■□□□□ 0.38
ATP2A1O14983 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A1O14983 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A1O14983 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.4■□□□□ 0.38
ATP2A1O14983 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A1O14983 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
ATP2A1O14983 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
ATP2A1O14983 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A1O14983 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 AL139384.1-201ENST00000612143 3047 ntBASIC17.39■□□□□ 0.38
ATP2A1O14983 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2A1O14983 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ATP2A1O14983 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.39■□□□□ 0.37
ATP2A1O14983 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ATP2A1O14983 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ATP2A1O14983 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A1O14983 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ATP2A1O14983 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.39■□□□□ 0.37
ATP2A1O14983 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP2A1O14983 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ATP2A1O14983 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 HIST2H2BB-201ENST00000449108 381 ntBASIC17.39■□□□□ 0.37
ATP2A1O14983 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A1O14983 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A1O14983 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A1O14983 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A1O14983 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.39■□□□□ 0.37
ATP2A1O14983 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A1O14983 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 AL365203.3-201ENST00000609742 2057 ntBASIC17.39■□□□□ 0.37
ATP2A1O14983 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
ATP2A1O14983 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A1O14983 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A1O14983 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 KRT8P4-201ENST00000509735 1454 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A1O14983 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 LINC02199-201ENST00000506655 2702 ntBASIC17.38■□□□□ 0.37
ATP2A1O14983 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A1O14983 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A1O14983 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ATP2A1O14983 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A1O14983 AL354877.1-201ENST00000424412 413 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms