Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AF274858.1-201ENST00000406288 372 ntBASIC15.95■□□□□ 0.14
SOX1O00570 KRT18P46-201ENST00000435568 1279 ntBASIC15.95■□□□□ 0.14
SOX1O00570 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.95■□□□□ 0.14
SOX1O00570 AC114947.1-202ENST00000514136 344 ntBASIC15.95■□□□□ 0.14
SOX1O00570 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX1O00570 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 HERC2P11-201ENST00000562845 725 ntBASIC15.95■□□□□ 0.14
SOX1O00570 AC100756.2-201ENST00000569537 736 ntBASIC15.95■□□□□ 0.14
SOX1O00570 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.95■□□□□ 0.14
SOX1O00570 AC004466.2-201ENST00000614749 516 ntBASIC15.95■□□□□ 0.14
SOX1O00570 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SOX1O00570 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 CTBP2P8-201ENST00000422584 1330 ntBASIC15.94■□□□□ 0.14
SOX1O00570 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 AC106827.1-201ENST00000366454 431 ntBASIC15.94■□□□□ 0.14
SOX1O00570 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 RN7SKP109-201ENST00000410592 316 ntBASIC15.94■□□□□ 0.14
SOX1O00570 AC108734.2-201ENST00000420887 1069 ntBASIC15.94■□□□□ 0.14
SOX1O00570 AL929302.1-201ENST00000426556 871 ntBASIC15.94■□□□□ 0.14
SOX1O00570 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.94■□□□□ 0.14
SOX1O00570 AC006122.1-201ENST00000493323 440 ntBASIC15.94■□□□□ 0.14
SOX1O00570 AC093826.1-201ENST00000508655 993 ntBASIC15.94■□□□□ 0.14
SOX1O00570 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.94■□□□□ 0.14
SOX1O00570 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.94■□□□□ 0.14
SOX1O00570 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC15.94■□□□□ 0.14
SOX1O00570 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC15.94■□□□□ 0.14
SOX1O00570 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.94■□□□□ 0.14
SOX1O00570 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.94■□□□□ 0.14
SOX1O00570 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.94■□□□□ 0.14
SOX1O00570 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SOX1O00570 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SOX1O00570 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.93■□□□□ 0.14
SOX1O00570 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.93■□□□□ 0.14
SOX1O00570 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SOX1O00570 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.93■□□□□ 0.14
SOX1O00570 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC15.93■□□□□ 0.14
SOX1O00570 HLA-K-203ENST00000430151 1046 ntBASIC15.93■□□□□ 0.14
SOX1O00570 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.93■□□□□ 0.14
SOX1O00570 RHOQP2-201ENST00000449922 579 ntBASIC15.93■□□□□ 0.14
SOX1O00570 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.93■□□□□ 0.14
SOX1O00570 AC006483.2-201ENST00000609813 515 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms