Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRRM3A6NNA2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRRM3A6NNA2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRRM3A6NNA2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
SRRM3A6NNA2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.91■□□□□ 0.14
SRRM3A6NNA2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.91■□□□□ 0.14
SRRM3A6NNA2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 MIR346-201ENST00000362234 95 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 MIR6869-201ENST00000619434 62 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 AC008267.7-201ENST00000624570 1194 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 AL109936.8-201ENST00000641772 604 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 AC152010.1-201ENST00000415779 2006 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 AC113367.3-201ENST00000508316 1912 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.9■□□□□ 0.14
SRRM3A6NNA2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.9■□□□□ 0.14
SRRM3A6NNA2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AL391825.1-201ENST00000457671 1364 ntBASIC15.89■□□□□ 0.13
SRRM3A6NNA2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 OR2I1P-210ENST00000642037 4691 ntBASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 TTTY23B-201ENST00000442790 549 ntBASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AC107918.2-201ENST00000530817 355 ntBASIC15.89■□□□□ 0.13
SRRM3A6NNA2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 AC008494.3-201ENST00000606615 944 ntBASIC15.89■□□□□ 0.13
SRRM3A6NNA2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.89■□□□□ 0.13
SRRM3A6NNA2 MIR6775-201ENST00000617557 69 ntBASIC15.89■□□□□ 0.13
SRRM3A6NNA2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRRM3A6NNA2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms