Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AL035414.1-201ENST00000451327 857 ntBASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AC226150.1-201ENST00000544259 466 ntBASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AC068867.1-201ENST00000559855 150 ntBASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AC006483.2-201ENST00000609813 515 ntBASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 AC006449.5-201ENST00000610658 2098 ntBASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88BA6NKF7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM88BA6NKF7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 ERP29P1-201ENST00000442902 706 ntBASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 RN7SL23P-201ENST00000484055 275 ntBASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 ALG3P1-201ENST00000508806 1114 ntBASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 MIR2392-201ENST00000584881 84 ntBASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 CYP4F36P-201ENST00000589193 186 ntBASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88BA6NKF7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 MST1L-201ENST00000442552 2185 ntBASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 VENTXP4-201ENST00000449029 958 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms