Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 RPSAP52-203ENST00000622976 1023 ntBASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAI2Q9Y5P3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 CROCCP4-201ENST00000457096 498 ntBASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI2Q9Y5P3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAI2Q9Y5P3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAI2Q9Y5P3 AC103702.1-201ENST00000548801 2630 ntBASIC15.46■□□□□ 0.06
RAI2Q9Y5P3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AL360270.3-201ENST00000609118 1348 ntBASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 DBET-201ENST00000630918 3363 ntBASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 ANKRD19P-201ENST00000338192 862 ntBASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 ACKR1-201ENST00000368121 1240 ntBASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AC093433.1-201ENST00000458048 571 ntBASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AC009486.1-201ENST00000569860 813 ntBASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAI2Q9Y5P3 AP005019.2-201ENST00000615104 511 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms