Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 CRYGEP-201ENST00000412192 528 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC105233.2-201ENST00000523697 349 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AF228730.5-201ENST00000530288 346 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC023141.13-201ENST00000604991 943 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AL161645.1-201ENST00000622716 1255 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC007064.4-201ENST00000637740 555 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AL031595.1-201ENST00000623969 4709 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC138969.3-201ENST00000546612 1459 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC138932.2-201ENST00000548268 1459 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 AC126755.4-201ENST00000549796 1459 ntBASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
RCL1Q9Y2P8 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 AL139010.1-201ENST00000454878 894 ntBASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 PRELID1P1-202ENST00000567272 903 ntBASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RCL1Q9Y2P8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RCL1Q9Y2P8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms