Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 MIR4683-201ENST00000579659 81 ntBASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 AC244093.1-201ENST00000610837 814 ntBASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 ZACNP1-201ENST00000612259 710 ntBASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 AC020910.5-201ENST00000623668 1865 ntBASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPF2Q9P2E5 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 AC104982.3-201ENST00000581995 514 ntBASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 AC011840.2-201ENST00000563063 1520 ntBASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 AP000593.2-201ENST00000542775 1433 ntBASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPF2Q9P2E5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AC023090.2-201ENST00000625182 2110 ntBASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 MIR1247-201ENST00000408206 136 ntBASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AC004945.1-201ENST00000416738 983 ntBASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AC006033.1-201ENST00000440505 426 ntBASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AL008638.5-201ENST00000623814 1298 ntBASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 AL109954.1-202ENST00000564051 2148 ntBASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPF2Q9P2E5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms