Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 AC098831.1-202ENST00000438821 336 ntBASIC13.13□□□□□ -0.31
COMMD9Q9P000 FAAHP1-202ENST00000446499 1238 ntBASIC13.13□□□□□ -0.31
COMMD9Q9P000 HCG4B-203ENST00000450128 991 ntBASIC13.13□□□□□ -0.31
COMMD9Q9P000 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 MIR4321-201ENST00000592276 80 ntBASIC13.13□□□□□ -0.31
COMMD9Q9P000 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 MIR7706-201ENST00000613747 67 ntBASIC13.13□□□□□ -0.31
COMMD9Q9P000 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 AC092135.3-201ENST00000624151 1846 ntBASIC13.13□□□□□ -0.31
COMMD9Q9P000 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.13□□□□□ -0.31
COMMD9Q9P000 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD9Q9P000 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC004870.1-201ENST00000315132 882 ntBASIC13.12□□□□□ -0.31
COMMD9Q9P000 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 RHOQP3-201ENST00000437982 621 ntBASIC13.12□□□□□ -0.31
COMMD9Q9P000 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC093909.1-201ENST00000504731 1122 ntBASIC13.12□□□□□ -0.31
COMMD9Q9P000 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC023141.13-201ENST00000604991 943 ntBASIC13.12□□□□□ -0.31
COMMD9Q9P000 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC148477.8-201ENST00000624298 468 ntBASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC010507.1-201ENST00000633895 436 ntBASIC13.12□□□□□ -0.31
COMMD9Q9P000 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD9Q9P000 PMS2P7-201ENST00000506558 1336 ntBASIC13.12□□□□□ -0.31
COMMD9Q9P000 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD9Q9P000 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms