Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SPDYE22P-201ENST00000582158 798 ntBASIC13.42□□□□□ -0.26
CDH20Q9HBT6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 BRI3BPP1-201ENST00000594224 787 ntBASIC13.42□□□□□ -0.26
CDH20Q9HBT6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 MIR8072-201ENST00000614241 80 ntBASIC13.42□□□□□ -0.26
CDH20Q9HBT6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 AC148477.4-201ENST00000613430 1793 ntBASIC13.42□□□□□ -0.26
CDH20Q9HBT6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CDH20Q9HBT6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 C1QBPP1-201ENST00000400117 770 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AP006294.1-201ENST00000415407 339 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 SOCS2P1-201ENST00000417727 557 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AC098850.1-201ENST00000419919 790 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 WASH4P-201ENST00000564273 1246 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AC120045.2-201ENST00000567334 178 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AC107373.2-201ENST00000607735 490 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AL358472.5-202ENST00000641448 1267 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 C18orf15-201ENST00000623680 2534 ntBASIC13.41□□□□□ -0.26
CDH20Q9HBT6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDH20Q9HBT6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms