Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 AL355334.1-201ENST00000417713 215 ntBASIC17.82■□□□□ 0.44
EFCC1Q9HA90 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 SERPINA13P-202ENST00000478994 924 ntBASIC17.82■□□□□ 0.44
EFCC1Q9HA90 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 ECM1P1-201ENST00000604092 1279 ntBASIC17.82■□□□□ 0.44
EFCC1Q9HA90 AP003419.4-201ENST00000616071 517 ntBASIC17.82■□□□□ 0.44
EFCC1Q9HA90 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 PAUPAR-201ENST00000630360 2965 ntBASIC17.82■□□□□ 0.44
EFCC1Q9HA90 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFCC1Q9HA90 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 AL023775.1-201ENST00000454907 1746 ntBASIC17.81■□□□□ 0.44
EFCC1Q9HA90 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 AC006480.2-201ENST00000609770 1337 ntBASIC17.81■□□□□ 0.44
EFCC1Q9HA90 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 AC079178.1-201ENST00000420915 656 ntBASIC17.81■□□□□ 0.44
EFCC1Q9HA90 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 AC091544.8-201ENST00000619490 361 ntBASIC17.81■□□□□ 0.44
EFCC1Q9HA90 CYP2T1P-202ENST00000641596 2535 ntBASIC17.81■□□□□ 0.44
EFCC1Q9HA90 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFCC1Q9HA90 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 TPM3P8-201ENST00000330554 643 ntBASIC17.8■□□□□ 0.44
EFCC1Q9HA90 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 AC114501.1-201ENST00000445949 172 ntBASIC17.8■□□□□ 0.44
EFCC1Q9HA90 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 AC244157.2-201ENST00000616239 1006 ntBASIC17.8■□□□□ 0.44
EFCC1Q9HA90 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFCC1Q9HA90 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms