Protein–RNA interactions for Protein: Q9BQ31

KCNS3, Potassium voltage-gated channel subfamily S member 3, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3Q9BQ31 AC093724.1-201ENST00000448659 1027 ntBASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 AC015911.4-201ENST00000588022 1070 ntBASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
KCNS3Q9BQ31 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 AC005252.3-201ENST00000623855 2258 ntBASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 FAM220BP-201ENST00000377689 816 ntBASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 GPS2P2-201ENST00000430745 888 ntBASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 AC069120.2-201ENST00000524091 540 ntBASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.17□□□□□ -0.14
KCNS3Q9BQ31 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 AC011477.6-201ENST00000604980 1927 ntBASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 MIR770-201ENST00000390219 98 ntBASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 MIR943-201ENST00000401286 94 ntBASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.16□□□□□ -0.14
KCNS3Q9BQ31 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms