Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 AC018665.1-201ENST00000622927 1362 ntBASIC10.17□□□□□ -0.78
LITAFQ99732 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
LITAFQ99732 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.17□□□□□ -0.78
LITAFQ99732 AL139010.1-201ENST00000454878 894 ntBASIC10.17□□□□□ -0.78
LITAFQ99732 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.17□□□□□ -0.78
LITAFQ99732 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
LITAFQ99732 AL356488.2-201ENST00000602755 427 ntBASIC10.17□□□□□ -0.78
LITAFQ99732 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.17□□□□□ -0.78
LITAFQ99732 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.17□□□□□ -0.78
LITAFQ99732 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 AMT-221ENST00000538581 2038 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LITAFQ99732 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LITAFQ99732 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.16□□□□□ -0.78
LITAFQ99732 AC140658.5-201ENST00000438532 169 ntBASIC10.16□□□□□ -0.78
LITAFQ99732 PRSS29P-201ENST00000440800 595 ntBASIC10.16□□□□□ -0.78
LITAFQ99732 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms